Elsevier

Toxicon

Volume 42, Issue 8, December 2003, Pages 827-840
Toxicon

Excitement ahead: structure, function and mechanism of snake venom phospholipase A2 enzymes

https://doi.org/10.1016/j.toxicon.2003.11.002Get rights and content

Abstract

Venom phospholipase A2 (PLA2) enzymes share similarity in structure and catalytic function with mammalian enzymes. However, in contrast to mammalian enzymes, many are toxic and induce a wide spectrum of pharmacological effects. Thus structure–function relationship of this group of small proteins is subtle, but complex puzzle to protein biochemists, molecular biologists, toxinologists, pharmacologists and physiologists. This review describes the present status of our understanding of their structure, function and mechanism. It was proposed that their unique ability to ‘target’ themselves to a specific organ or tissue is due to their high affinity binding to specific proteins which act as receptors (more precisely, acceptors). This specific binding of PLA2 is conferred by the presence of a ‘pharmacological site’ on its surface which is independent of the catalytic site. The high affinity interaction of PLA2 with its acceptor (or target protein) is probably due to the complementarity, in terms of charges, hydrophobicity and van der Waal's contact surfaces, between the pharmacological site and the binding site on the surface of the acceptor protein. Upon binding to the target, the PLA2 can induce its pharmacological effects by mechanisms either dependent on or independent of its catalytic activity. Because of the unprecedented wide spectrum of specific targeting to various tissues and organs, identification of the pharmacological sites has potential for exploitation in development of novel systems useful for ‘delivering’ specific proteins to a particular target tissue or organ. Thus research in this field will provide a lot of exciting opportunities.

Introduction

Phospholipase A2 (PLA2) enzymes hydrolyze glycerophospholipids at the sn-2 position of the glycerol backbone releasing lysophospholipids and fatty acids. They occur ubiquitously in nature as both intracellular and extracellular forms and hydrolyze various phospholipids. They are the most studied among all phospholipases because of their pivotal role in various biological activities. Mammalian PLA2 enzymes play important role in fertilization (Fry et al., 1992), cell proliferation (Arita et al., 1991), smooth muscle contraction (Nakajima et al., 1992, Sommers et al., 1992), and hypersensitization and chronic inflammatory diseases (Vadas and Pruzanski, 1986, Vadas et al., 1993). They are also important in cellular functions such as signal transduction via biosynthesis of prostaglandins and leukotrienes, and membrane homeostasis including the maintenance of the cellular phospholipid pools and membrane repair through deacylation/reacylation (Verheij et al., 1981, Jain and Berg, 1989, Dennis et al., 1991, Kudo et al., 1993, Dennis, 1994). However, mammalian enzymes are generally nontoxic and fail to induce potent pharmacological effects. On the other hand, snake venom PLA2 enzymes, in addition to their possible role in the digestion of the prey, exhibit a wide variety of pharmacological effects by interfering in normal physiological processes (Kini, 1997a) (Table 1). Some of the most toxic and potent pharmacologically active components of snake venoms are either PLA2 enzymes or their protein complexes. For example, all known presynaptic neurotoxins from snake venom are PLA2 enzymes per se or contain PLA2 as an integral part (Gubenšek et al., 1997, Bon, 1997). PLA2 myotoxins are more potent and fast-acting than their nonenzymatic counterparts (Fletcher et al., 1997). The ability to induce pharmacological effects with higher potencies underscores the importance of PLA2 enzymes in snake venom toxicity.

So far, the amino acid sequences of over 280 PLA2 enzymes have been determined (Danse et al., 1997, Tan et al., 2003). (A database of snake venom PLA2 enzymes is available at http://sdmc.lit.org.sg/Templar/DB/snaketoxin_PLA2/index.html). Despite the differences in their pharmacological properties, they share 40–99% identity in their amino acid sequences and hence significant similarity in their three dimensional folding (Scott, 1997). Thus the functional differences among PLA2 enzymes cannot be easily correlated to their structural differences. The structural similarity makes the structure–function relationships subtle, complicated and challenging. The shared common ability to hydrolyze at the sn-2 position of phospholipids and the lack correlation between enzymatic activity and lethal toxicity or pharmacological potency (Rosenberg, 1997a, Rosenberg, 1997b), make the mechanisms by which snake venom PLA2 enzymes induce a wide spectrum of pharmacological effects intriguing. A monograph (Kini, 1997b) on snake venom PLA2 enzymes deals with their structure, function and mechanism. This review provides an overview of the structure–function relationships and the mechanisms of snake venom PLA2 enzymes and their implications.

Section snippets

Purification

The quality of enzyme preparations is crucial for structure–function and mechanistic studies. Any contamination may contribute significantly to the results; such data could be invalid and may complicate the studies on structure-function and mechanism. The following two factors should be considered during the purification of PLA2 enzymes from snake venoms: (a) Snake venoms often contain a large number of PLA2 isoenzymes. For example, Naja naja, Vipera russelli, Trimeresurus flavoviridis,

Catalysis

PLA2 enzymes are unique hydrolytic enzymes in that they are highly soluble in water but hydrolyze water-insoluble substrate phospholipids. They hydrolyze phospholipids in monomeric, micellar or lipid bilayer phases. They exhibit a large and abrupt increase (up to 10,000-fold) in their catalytic activity when monomeric phospholipids aggregate to form micelles at their critical micellar concentration (Verger and DeHaas, 1973, Verger et al., 1973, Jain and Cordes, 1973a, Jain and Cordes, 1973b,

Pharmacological effects

Snake venom PLA2 enzymes exhibit a wide variety of pharmacological effects (Table 1). When studying a new enzyme, it is important to examine its pharmacological effects in intact animals, rather than in isolated tissues or in vitro methods. The in vitro studies sometimes show nonspecific effects that are due to the inherent phospholipolytic activity resulting in wrong conclusions. Occasionally, some of the pharmacological effects can be studied only in in vitro systems.

In most cases, snake

Target model and pharmacological specificity

Although a variety of pharmacological effects are induced by PLA2 enzymes, not all the effects are exhibited by all PLA2 enzymes. Each enzyme exhibits a specific effect. For example, β-bungarotoxin, a PLA2 containing toxin, induces a presynaptic effect on nicotinic acetylcholine transmission (Strong et al., 1976) but not glutamate and adrenergic transmission even at high concentrations (Abe et al., 1977). It does not show postsynaptic activity (Yang, 1978), myotoxicity (Fraenkel-Conrat, 1982-83

Enzymatic activity and pharmacological effects

Upon binding to the target protein, PLA2 enzymes can induce their pharmacological effects through mechanisms that are either dependent on or independent of their enzymatic activity. In the mechanisms that are dependent on enzymatic activity, either the hydrolysis of intact phospholipids or the released products such as lysophospholipids and fatty acids can cause the pharmacological effect (For details, see Kini and Evans, 1989a). The inherent enzymatic activity can cause membrane damage and

Pharmacological sites

PLA2 enzymes bind to target proteins through specific pharmacological sites (Fig. 1) (Kini and Evans, 1989a). The presence of pharmacological sites is supported by chemical modification studies, polyclonal and monoclonal antibodies and interaction of inhibitors (for reviews, see Yang, 1997, Stiles and Choumet, 1997, Gowda, 1997). Various chemical methods to modify specific amino acid residues have been used to identify these structural features. Despite systematic efforts, it has been difficult

Accelerated evolution of molecular surface

Recently by comparing the structures of 127 snake venom PLA2 enzymes, we showed that mutational hot spots occur on the surface of this protein molecule (Kini and Chan, 1999). Natural substitutions occur about 2.6–3.5 times greater in fully exposed residues than in the buried residues. As described above, the surface residues are important in molecular recognition of target proteins. Thus, natural substitutions in the surface residues would contribute directly towards modifying the molecular

Future prospects

Snake venom PLA2 enzymes are small enzymes which cause havoc by interfering in the normal physiological processes of the victim and inducing a variety of pharmacological effects. They provide a great challenge to protein chemists as subtle and complex puzzles in structure-function relationships. A better understanding will contribute to our knowledge of protein–protein interactions, protein targeting and protein engineering and to the development of better targeted delivery systems. Further

Acknowledgements

I thank my colleagues and mentors who ‘supported’ and nurtured at various levels several ideas presented in this chapter. This work is supported by Academic research grants from the National University of Singapore.

References (141)

  • R Gao et al.

    Purification and properties of three new phospholipase A2 isoenzymes from Micropechis ikaheka venom

    Biochim. Biophys. Acta

    (2001)
  • P Gopalakrishnakone et al.

    Cellular and mitochondrial changes induced in the structure of murine skeletal muscle by crotoxin, a neurotoxic phospholipase A2 complex

    Toxicon

    (1984)
  • M.J Hseu et al.

    Purification and partial amino acid sequence of a novel protein of the reticulocalbin family

    Biochem. Biophys. Res. Commun.

    (1997)
  • M.J Hseu et al.

    Crocalbin: a new calcium-binding protein that is also a binding protein for crotoxin, a neurotoxic phospholipase A2

    FEBS Lett.

    (1999)
  • M Inada et al.

    Determinants of the inhibitory action of purified 14-kDa phospholipases A2 on cell-free prothrombinase complex

    J. Biol. Chem.

    (1994)
  • G Ivanovski et al.

    The amino acid region 115-119 of ammodytoxins plays an important role in neurotoxicity

    Biochem. Biophys. Res. Commun.

    (2000)
  • M.K Jain et al.

    The kinetics of interfacial catalysis by phospholipase A2 and regulation of interfacial activation: hopping versus scooting

    Biochim. Biophys. Acta

    (1989)
  • S Kasturi et al.

    Purification and characterization of a major phospholipase A2 from Russell's viper (Vipera russelli) venom

    Toxicon

    (1989)
  • R.T Kerns et al.

    Targeting of venom phospholipases: the strongly anticoagulant phospholipase A2 from Naja nigricollis venom binds to coagulation factor Xa to inhibit the prothrombinase complex

    Arch. Biochem. Biophys.

    (1999)
  • R.M Kini

    Proline brackets and identification of potential functional sites in proteins: toxins to therapeutics

    Toxicon

    (1998)
  • R.M Kini et al.

    Structure–function relationships of phospholipases: The anticoagulant region of phospholipases A2

    J. Biol. Chem.

    (1987)
  • R.M Kini et al.

    A model to explain the pharmacological effects of snake venom phospholipases A2

    Toxicon

    (1989)
  • R.M Kini et al.

    The role of enzymatic activity in inhibition of the extrinsic tenase complex by phospholipase A2 isoenzymes from Naja nigricollis venom

    Toxicon

    (1995)
  • R.M Kini et al.

    A hypothetical structural role for proline residues in the flanking segments of protein–protein interaction sites

    Biochem. Biophys. Res. Commun.

    (1995)
  • R.M Kini et al.

    Prediction of potential protein–protein interaction sites from amino acid sequence. Identification of a fibrin polymerization site

    FEBS Lett.

    (1996)
  • R.M Kini et al.

    Structure function relationships of phospholipases I: prediction of presynaptic neurotoxicity

    Toxicon

    (1986)
  • R.M Kini et al.

    Amino terminal region three isoenzymes of phospholipases A2 (TFV PLIa, TFV PLIb AND TFV PLX) from Trimeresurus flavoviridis (habu snake) venom and the complete amino acid sequence of the basic phospholipase, TFV PLX

    Toxicon

    (1986)
  • L.L Kirkpatrick et al.

    Comparison of Biochemical interactions of the neuronal pentraxins. Neuronal pentraxin (NP) receptor binds to taipoxin and taipoxin-associated calcium-binding protein 49 via NP1 and NP2

    J. Biol. Chem.

    (2000)
  • I Križaj et al.

    Neuronal receptors for phospholipases A2 and β-neurotoxicity

    Biochimie

    (2000)
  • I Križaj et al.

    Primary structure of ammodytoxin C further reveals the toxic site of ammodytoxin

    Biochim. Biophys. Acta

    (1989)
  • I Križaj et al.

    Ammodytoxin A acceptor in bovine brain synaptic membranes

    Toxicon

    (1995)
  • I Križaj et al.

    Re-examination of crotoxin-membrane interactions

    Toxicon

    (1996)
  • I Kudo et al.

    Mammalian non-pancreatic phospholipases A2

    Biochim. Biophys. Acta

    (1993)
  • G Lambeau et al.

    Identification and properties of very high affinity brain membrane-binding sites for a neurotoxic phospholipase from the taipan venom

    J. Biol. Chem.

    (1989)
  • G Lambeau et al.

    Identification and purification of a very high affinity binding protein for toxic phospholipases A2 in skeletal muscle

    J. Biol. Chem.

    (1990)
  • G Lambeau et al.

    Structural elements of secretory phospholipases A2 involved in the binding to M-type receptors

    J. Biol. Chem.

    (1995)
  • E.C.T Landucci et al.

    Crotoxin induces aggregation of human washed platelets

    Toxicon

    (1994)
  • B Lomonte et al.

    Neutralizing interaction between heparins and myotoxin II, a lysine 49 phospholipase A2 from Bothrops asper snake venom. Identification of a heparin-binding and cytolytic toxin region by the use of synthetic peptides and molecular modeling

    J. Biol. Chem.

    (1994)
  • B Lomonte et al.

    Tyr→Trp-substituted peptide 115-129 of a Lys49 phospholipase A2 expresses enhanced membrane-damaging activities and reproduces its in vivo myotoxic effect

    Biochim. Biophys. Acta.

    (1999)
  • C.M Mounier et al.

    Inhibition of prothrombinase by human secretory phospholipase A2 involves binding to factor Xa

    J. Biol. Chem.

    (1998)
  • M Nakajima et al.

    Effect of pancreatic type phospholipase A2 on isolated porcine cerebral arteries via its specific binding sites

    FEBS Lett.

    (1992)
  • I Nobuhisa et al.

    Accelerated evolution of Trimeresurus okinavensis venom gland phospholipase A2 isoenzyme-encoding genes

    Gene

    (1996)
  • C.E Núñez et al.

    Identification of the myotoxic site of the Lys49 phospholipase A2 from Agkistrodon piscivorus piscivorus snake venom: synthetic C-terminal peptides from Lys49, but not from Asp49 myotoxins, exert membrane-damaging activities

    Toxicon

    (2001)
  • T Ogawa et al.

    Accelerated evolution of snake venom phospholipase A2 isozymes for acquisition of diverse physiological functions

    Toxicon

    (1996)
  • H Rehm et al.

    Binding of β-bungarotoxin to synaptic membrane fractions of chick brain

    J. Biol. Chem.

    (1982)
  • T Abe et al.

    Isolation and characterization of presynaptically acting neurotoxins from the venom of Bungarus snakes

    Eur. J. Biochem.

    (1977)
  • A Alape-Giron et al.

    Elapid venom toxins: multiple recruitments of ancient scaffolds

    Eur. J. Biochem.

    (1999)
  • E Arrigada et al.

    Search for a toxic site in snake venom phospholipases A2

    Arch. Biol. Med. Exp.

    (1989)
  • A.R Black et al.

    Solubilization and physical characterization of acceptors for dendrotoxin and β-bungarotoxin from synaptic membranes of rat brain

    Biochemistry

    (1988)
  • S.E Blondelle et al.

    Hemolytic and antimicrobial activities of the twenty-four individual omission analogues of melittin

    Biochemistry

    (1991)
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